BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E12SP1|AL426388
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1792 1622 0.0
>3x_Contig1792
Length = 28468
Score = 1622 bits (817), Expect = 0.0
Identities = 819/821 (99%)
Strand = Plus / Plus
Query: 1 gtgccgccgaaactccaaacccttcaccagctaaaagatcgatctcgcagcttgtctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23250 gtgccgccgaaactccaaacccttcaccagctaaaagatcgatctcgcagcttgtctcag 23309
Query: 61 aagctgcaaccacagttggaaaggagaagctcaaacgcagggttcaacctactctcgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23310 aagctgcaaccacagttggaaaggagaagctcaaacgcagggttcaacctactctcgtca 23369
Query: 121 catcagatcaacctaaatagaactagattagtttatagagagggagatggcggaataaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23370 catcagatcaacctaaatagaactagattagtttatagagagggagatggcggaataaca 23429
Query: 181 cgtgactttgaactgttctctacgcaataattactgtgtatagtagtaagtaataatcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23430 cgtgactttgaactgttctctacgcaataattactgtgtatagtagtaagtaataatcgc 23489
Query: 241 cgagttaagattcgagacaccagccgattgccttattgccaagcccgtkacaagaatcag 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 23490 cgagttaagattcgagacaccagccgattgccttattgccaagcccgtgacaagaatcag 23549
Query: 301 ggtgttggcagttctaggaggtagaaacagaaaggtctgggaaacaatatagaaacaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23550 ggtgttggcagttctaggaggtagaaacagaaaggtctgggaaacaatatagaaacaaaa 23609
Query: 361 taggaaatgcaaaawaatggttagtcacgtgatcaacatttctctctggaaagacatcta 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23610 taggaaatgcaaaaaaatggttagtcacgtgatcaacatttctctctggaaagacatcta 23669
Query: 421 gctgtaaaggacacactctagcatgtaattgagaatggatttcatttactggtatatgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23670 gctgtaaaggacacactctagcatgtaattgagaatggatttcatttactggtatatgta 23729
Query: 481 cgatttatagatatctacacaattgtacctatcatttcagtagagactgtaggtattcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23730 cgatttatagatatctacacaattgtacctatcatttcagtagagactgtaggtattcac 23789
Query: 541 tgttttccacctttagttccatactctttcttgcctgccataccattaatctctttcttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23790 tgttttccacctttagttccatactctttcttgcctgccataccattaatctctttcttt 23849
Query: 601 cttctatggaaagatcgttgggattcaagtttgaaagatcttcttgtggatccacgttga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23850 cttctatggaaagatcgttgggattcaagtttgaaagatcttcttgtggatccacgttga 23909
Query: 661 atttttttagcagattgtcagctttaatgttggatcttttccgtggatctgtagatgtgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23910 atttttttagcagattgtcagctttaatgttggatcttttccgtggatctgtagatgtgc 23969
Query: 721 tattgttgtttgtattgtttcctgtagttacagagcttccggtcgattgattttgaccat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23970 tattgttgtttgtattgtttcctgtagttacagagcttccggtcgattgattttgaccat 24029
Query: 781 tggaagaattgccacctgtttcagattctgggacgtaatct 821
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 24030 tggaagaattgccacctgtttcagattctgggacgtaatct 24070
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6188
Number of Sequences: 1807
Number of extensions: 6188
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)